Research

Mapping the topographic organization of the human zona incerta using diffusion MRI

Haast RA, Kai J, Taha A, Liu V, Kasa LW, Gilmore G, Guye M, Khan AR, Lau JC. bioRxiv.

doi: 10.1101/2024.09.05.610266

Mapping the spatiotemporal continuum of structural connectivity development across the human connectome in youth

Xu X, Yang H, Cong J, Xu H, Kai J, Zhao S, Li Y, Shou H, Wang K, Sydnor VJ, Xu T, Yeh FC, Cui Z. Nat Commun.

doi: 10.1038/s41467-026-73072-6

Styx: A multi-language API Generator for Command-Line Tools

Rupprecht F, Kai J, Shrestha B, Giavasis S, Xu T, Glatard T, Milham MP, Kiar G. bioRxiv.

doi: 10.1101/2025.07.24.666435

MRI-degad: toward accurate conversion of gadolinium-enhanced T1w MRIs to non-contrast-enhanced scans using CNNs

Ogunsanya F, Taha A, Gilmore G, Kai J, Kuehn T, Thurairajah A, Tenorio MC, Khan AR, Lau JC. Int J Comput Assist Radiol Surg.

doi: 10.1007/s11548-024-03186-z

A population-averaged structural connectomic brain atlas dataset from 422 HCP-aging subjects

Xiao Y, Gilmore G, Kai J, Lau JC, Peters T, Khan AR. Data Brief.

doi: 10.1016/j.dib.2023.109513

Aberrant frontal lobe "U"-shaped association fibers in first-episode schizophrenia: A 7-Tesla Diffusion Imaging Study

Kai J, Mackinley M, Khan AR, Palaniyappan L. Neuroimage Clin.

doi: 10.1016/j.nicl.2023.103367

Magnetic resonance imaging datasets with anatomical fiducials for quality control and registration

Taha A, Gilmore G, Abbass M, Kai J, Kuehn T, Demarco J, Gupta G, Zajner C, Cao D, Chevalier R, Ahmed A, Hadi A, Karat BG, Stanley OW, Park PJ, Ferko KM, Hemachandra D, Vassallo R, Jach M, Thurairajah A, Wong S, Tenorio MC, Ogunsanya F, Khan AR, Lau JC. Sci Data.

doi: 10.1038/s41597-023-02330-9

Funcmasker-flex: An Automated BIDS-App for Brain Segmentation of Human Fetal Functional MRI data

Nichols ES, Correa S, Van Dyken P, Kai J, Kuehn T, de Ribaupierre S, Duerden EG, Khan AR. Neuroinformatics.

doi: 10.1007/s12021-023-09629-3

Mapping the subcortical connectome using in vivo diffusion MRI: Feasibility and reliability

Kai J, Khan AR, Haast RA, Lau JC. Neuroimage.

doi: 10.1016/j.neuroimage.2022.119553

Assessing the Reliability of Template-Based Clustering for Tractography in Healthy Human Adults

Kai J, Khan AR. Front Neuroinform.

doi: 10.3389/fninf.2022.777853

Diffusion dispersion imaging: Mapping oscillating gradient spin-echo frequency dependence in the human brain

Arbabi A, Kai J, Khan AR, Baron CA. Magn Reson Med.

doi: 10.1002/mrm.28083

A framework for evaluating correspondence between brain images using anatomical fiducials

Lau JC, Parrent AG, Demarco J, Gupta G, Kai J, Stanley OW, Kuehn T, Park PJ, Ferko K, Khan AR, Peters TM. Hum Brain Mapp.

doi: 10.1002/hbm.24693